All the teaching materials on this page are shared under a CC BY-NC 4.0 license.
If you're interested in sources, just ask me.

BioComp Summer School 2017
Around Machine Learning in 90 Minutes [slides]
Interpretable Machine Learning for Precision Medicine [slides]

The 2017 Microbiome Summer School
Machine learning for efficient biomarker discovery
[slides] [tutorial]

2017: Data scientist online lectures (in French) with OpenClassrooms
Je participe à l'élaboration du parcours « Data Scientist », d'OpenClassrooms, en collaboration avec CentraleSupélec. Cours actuellement disponibles :

March 2017: Large scale machine learning and data mining
A 5-day intensive course for third year students at Mines ParisTech and more.

October 2016: Fouille de donnéees de type graphe et applications chémoinformatiques
Une journée dans le cadre du Master M2BI de Paris Diderot.

Fall 2016: Introduction to Genomics and Bioinformatics
This is a 40-hour course I'm organizing with Thomas Walter for second year students at Mines ParisTech.

Fall 2016: Foundations of Machine Learning
This is a 33-hour course I'm teaching at Ecole Centrale Paris, as part of their Engineering Program as well as their M.Sc. in Data Science. See the course website.

May 2016: Support vector machines, graph kernels, & bioinformatics
Intervention dans le cours Apprentissage automatique de S4 à Mines ParisTech.

January 2016: Fouille de donnéees de type graphe et applications chémoinformatiques
Une journée dans le cadre du Master M2BI de Paris Diderot.

Fall 2015: Introduction to Genomics and Bioinformatics
This is a 40-hour course I'm organizing with Thomas Walter for second year students at Mines ParisTech.

Fall 2015: Foundations of Machine Learning
This is a 33-hour course I'm teaching at Ecole Centrale Paris, as part of their Engineering Program as well as their M.Sc. in Data Science. See the course website.

May 2015: Support vector machines
This lecture, mostly based on materials from Jean-Philippe Vert, is part of a Machine Learning course for second year students at Mines ParisTech (somewhat equivalent to upper division undergraduate).

January 2015: Graph mining and chemoinformatics
This lecture is part of a bioinformatics masters program at Université Paris Diderot.

Fall 2014: Introduction to Genomics and Bioinformatics
This is a course I organized with Véronique Stoven and Thomas Walter for second year students at Mines ParisTech. I've taught two four-hour blocks (the lecture notes aren't fully developed, but there's quite a few more details in them than in the slides already):

Winter 2012-13: Data Mining in Bioinformatics
Course (M.Sc. level) taught with Karsten Borgwardt and Dominik Grimm at the University of Tübingen. Course website here. Lecture slides:

  • Day 5: Frequent subgraph mining [pdf]
  • Day 7: Clustering in bioinformatics: clustering gene expression data [pdf]
  • Day 9: Graph mining for chemoinformatics and drug discovery [pdf]

Winter 2011-12: Data Mining in Bioinformatics
Course (M. Sc. level) taught with Karsten Borgwardt at the University of Tübingen. Course website here. Lecture slides: